kfukuta/wf-transcriptomes-v202
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Merge branch 'CW-5950' into 'dev'

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Fix aws/docker demo cmd [CW-5950]

Closes CW-5950

See merge request epi2melabs/workflows/wf-transcriptomes!210
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Sarah Griffiths 2025-04-11 13:22:49 +00:00
commit 1d76e7326e
6 changed files with 8 additions and 7 deletions
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CHANGELOG.md
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@ -17,6 +17,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
- `all_gene_counts.tsv` contained the DE counts results.
- Reduced memory usage of the report workflow process.
- Output BAM alignments in all cases unless the workflow is run with `transcriptome_source` set to `precomputed`.
- Corrected the demo command in the `README.md`.
- The merged transcriptome generated for differential expression analysis now only contains the exons and not the full genomic sequence.
- Output the gene name annotated differential expression analysis count files only.
- Only use full length reads in the differential expression analysis.