diff --git a/README.md b/README.md index c0fb19a..6b4f5b8 100644 --- a/README.md +++ b/README.md @@ -127,7 +127,7 @@ tar -xzvf test_data.tar.gz **Example execution of a workflow for reference-based transcript assembly and fusion detection** ``` OUTPUT=~/output; -nexflow run epi2me-labs/wf-transcriptomes \ +nextflow run epi2me-labs/wf-transcriptomes \ --fastq ERR6053095_chr20.fastq \ --ref_genome chr20/hg38_chr20.fa \ --ref_annotation chr20/gencode.v22.annotation.chr20.gtf \ diff --git a/docs/quickstart.md b/docs/quickstart.md index 484e47d..582cadd 100644 --- a/docs/quickstart.md +++ b/docs/quickstart.md @@ -37,7 +37,7 @@ tar -xzvf test_data.tar.gz **Example execution of a workflow for reference-based transcript assembly and fusion detection** ``` OUTPUT=~/output; -nexflow run epi2me-labs/wf-transcriptomes \ +nextflow run epi2me-labs/wf-transcriptomes \ --fastq ERR6053095_chr20.fastq \ --ref_genome chr20/hg38_chr20.fa \ --ref_annotation chr20/gencode.v22.annotation.chr20.gtf \