Fix config

nextflow.config

@@ -9,6 +9,7 @@
 //
 // for further help editing this file.
 
+
 profiles {
     // the "standard" profile is used implicitely by nextflow
     // if no other profile is given on the CLI
@@ -20,7 +21,7 @@ profiles {
             runOptions = "--user \$(id -u):\$(id -g) --group-add 100"
         }
         process {
-            withLabel:default {
+            withLabel:pysam {
                 container = 'workflow-template:latest'
             }
         }
@@ -33,7 +34,7 @@ profiles {
             enabled = false
         }
         process {
-            withLabel:default {
+            withLabel:pysam {
                 conda = "environment.yaml"
             }
         }

workflow.nf

@@ -32,7 +32,7 @@ if(params.help) {
 
 process readSeqs {
     // Just write a file with sequence lengths
-    label "default"
+    label "pysam"
     input:
         file reads
     output: