CW-2307 ref_transcriptome default not null

2023-06-28 15:19:41 +00:00 · 2023-06-28 15:19:41 +00:00 · 79d5821c14
commit 79d5821c14
parent cb34c14421
2 changed files with 3 additions and 1 deletions
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@ -8,6 +8,9 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 ### Changed
 - GitHub issue templates

+### Fixed
+- Remove default of null for `--ref_transcriptome`
+
 ## [v0.1.13]
 ### Added
 - Handling for GFF3 reference_annotation file type.
--- a/nextflow_schema.json
+++ b/nextflow_schema.json
@ -40,7 +40,6 @@
                },
                "ref_transcriptome": {
                    "type": "string",
-                    "default": "null",
                    "format": "file-path",
                    "description": "Transcriptome reference file. Required for precomputed transcriptome calculation and for differential expression analysis.",
                    "help_text": "A reference transcriptome related to the sample under study. Must be supplied when the 'Transcriptome source' parameter has been set to 'precomputed' or to perform differential expression."