kfukuta/wf-transcriptomes-v202
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CW-2307 ref_transcriptome default not null

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Sarah Griffiths 2023-06-28 15:19:41 +00:00
parent cb34c14421
commit 79d5821c14
2 changed files with 3 additions and 1 deletions
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3
CHANGELOG.md
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@ -8,6 +8,9 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
### Changed ### Changed
- GitHub issue templates - GitHub issue templates
### Fixed
- Remove default of null for `--ref_transcriptome`
## [v0.1.13] ## [v0.1.13]
### Added ### Added
- Handling for GFF3 reference_annotation file type. - Handling for GFF3 reference_annotation file type.

1
nextflow_schema.json
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@ -40,7 +40,6 @@
}, },
"ref_transcriptome": { "ref_transcriptome": {
"type": "string", "type": "string",
"default": "null",
"format": "file-path", "format": "file-path",
"description": "Transcriptome reference file. Required for precomputed transcriptome calculation and for differential expression analysis.", "description": "Transcriptome reference file. Required for precomputed transcriptome calculation and for differential expression analysis.",
"help_text": "A reference transcriptome related to the sample under study. Must be supplied when the 'Transcriptome source' parameter has been set to 'precomputed' or to perform differential expression." "help_text": "A reference transcriptome related to the sample under study. Must be supplied when the 'Transcriptome source' parameter has been set to 'precomputed' or to perform differential expression."