kfukuta/wf-transcriptomes-v202
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity

Fix demo command

Browse Source
This commit is contained in:
Neil Horner 2024-01-17 15:16:07 +00:00
parent 58d7c7db5e
commit b10ca2d9dc
2 changed files with 2 additions and 2 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

2
README.md
View File

@ -62,7 +62,7 @@ tar -xzvf differential_expression.tar.gz
``` ```
The workflow can be run with the demo data using: The workflow can be run with the demo data using:
``` ```
nextflow run epi2me-labs/wf-transcriptome \ nextflow run epi2me-labs/wf-transcriptomes \
--fastq differential_expression/differential_expression_fastq \ --fastq differential_expression/differential_expression_fastq \
--de_analysis --ref_genome differential_expression/hg38_chr20.fa \ --de_analysis --ref_genome differential_expression/hg38_chr20.fa \
--transcriptome-source reference-guided \ --transcriptome-source reference-guided \

2
docs/04_install_and_run.md
View File

@ -22,7 +22,7 @@ tar -xzvf differential_expression.tar.gz
``` ```
The workflow can be run with the demo data using: The workflow can be run with the demo data using:
``` ```
nextflow run epi2me-labs/wf-transcriptome \ nextflow run epi2me-labs/wf-transcriptomes \
--fastq differential_expression/differential_expression_fastq \ --fastq differential_expression/differential_expression_fastq \
--de_analysis --ref_genome differential_expression/hg38_chr20.fa \ --de_analysis --ref_genome differential_expression/hg38_chr20.fa \
--transcriptome-source reference-guided \ --transcriptome-source reference-guided \