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Override singularity CI

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This commit is contained in:
Rory Munro 2026-05-22 10:15:55 +00:00
parent dac0a6ef01
commit bfebfaa4b3
1 changed files with 6 additions and 1 deletions
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7
.gitlab-ci.yml
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@ -178,4 +178,9 @@ docker-run:
NF_WORKFLOW_OPTS: "--fastq ${CI_PROJECT_NAME}/data/mouse_subset_test/samples \ NF_WORKFLOW_OPTS: "--fastq ${CI_PROJECT_NAME}/data/mouse_subset_test/samples \
--de_analysis --ref_genome ${CI_PROJECT_NAME}/data/mouse_subset_test/mouse_subset.fa \ --de_analysis --ref_genome ${CI_PROJECT_NAME}/data/mouse_subset_test/mouse_subset.fa \
--ref_annotation ${CI_PROJECT_NAME}/data/mouse_subset_test/mouse_subset.gtf.gz \ --ref_annotation ${CI_PROJECT_NAME}/data/mouse_subset_test/mouse_subset.gtf.gz \
--direct_rna --sample_sheet ${CI_PROJECT_NAME}/data/mouse_subset_test/sample_sheet.csv" --direct_rna --sample_sheet ${CI_PROJECT_NAME}/data/mouse_subset_test/sample_sheet.csv"
singularity-run:
rules:
- when: never