kfukuta/wf-transcriptomes-v202
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Merge branch 'container_pychop_2.7.9' into 'dev'

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Container pychop 2.7.9

See merge request epi2melabs/workflows/wf-transcriptomes!134
This commit is contained in:
Neil Horner 2023-10-04 16:23:32 +00:00
commit c9f3b8da4a
2 changed files with 6 additions and 2 deletions
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4
CHANGELOG.md
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@ -4,6 +4,10 @@ All notable changes to this project will be documented in this file.
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.1.0/), The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.1.0/),
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html). and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
## [v0.4.1]
### Changed
- Updated docker container with Pychopper to support LSK114.
## [v0.4.0] ## [v0.4.0]
### Fixed ### Fixed
- Remove dead links from README - Remove dead links from README

4
nextflow.config
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@ -98,7 +98,7 @@ params {
"--ref_genome 'wf-transcriptomes-demo/hg38_chr20.fa'", "--ref_genome 'wf-transcriptomes-demo/hg38_chr20.fa'",
] ]
agent = null agent = null
container_sha = "shab7142eb91ba48033b690c29d2a4252c45d85a1de" container_sha = "shae7c9f184996a384e99be68e790f0612f0c732867"
common_sha = "sha0a6dc21fac17291f4acb2e0f67bcdec7bf63e6b7" common_sha = "sha0a6dc21fac17291f4acb2e0f67bcdec7bf63e6b7"
} }
} }
@ -110,7 +110,7 @@ manifest {
description = 'Transcriptome analysis including gene fusions, differential expression as well as assembly and annotation of cDNA and direct RNA sequencing data.' description = 'Transcriptome analysis including gene fusions, differential expression as well as assembly and annotation of cDNA and direct RNA sequencing data.'
mainScript = 'main.nf' mainScript = 'main.nf'
nextflowVersion = '>=23.04.2' nextflowVersion = '>=23.04.2'
version = 'v0.4.0' version = 'v0.4.1'
} }
executor { executor {