diff --git a/docs/images/wf-transcriptomes.drawio.svg b/docs/images/wf-transcriptomes.drawio.svg index 341ed6a..958a80f 100644 --- a/docs/images/wf-transcriptomes.drawio.svg +++ b/docs/images/wf-transcriptomes.drawio.svg @@ -1,4 +1,4 @@ -
Transcriptome construction
Differential expression
(Requires multiple conditions & replicates)
Sample Sheet
Reference Genome
Reference Annotation
Alignment Statistics
Transcriptome GTF
Annotation Summary
Classification Summary
DE Results
DTU Results
Transcriptome FASTA
Report HTML
Read Statistics
Transcriptome FASTA
Gene & Transcript Count TSVs
Classification Summary
Transcriptome GTF
Gene & Transcript Count TSVs
FASTQ
BAM
DEXSeq
Report
DESeq2
minimap2
bambu
fastcat
Prepare annotation
SQANTI3
Validation
wf-transcriptomes
v2.0.*
Main workflow
Per-sample analysis
Optional
\ No newline at end of file +
Transcriptome construction
Differential expression
(Requires multiple conditions & replicates)
Sample Sheet
Reference Genome
Reference Annotation
Alignment Statistics
Transcriptome GTF
Annotation Summary
Classification Summary
DE Results
DTU Results
Transcriptome FASTA
Report HTML
Read Statistics
Transcriptome FASTA
Gene & Transcript Count TSVs
Classification Summary
Transcriptome GTF
Gene & Transcript Count TSVs
FASTQ
BAM
bedMethyl
DEXSeq
Report
DESeq2
minimap2
bambu
fastcat
Prepare annotation
SQANTI3
Validation
modkit
wf-transcriptomes
v2.0.*
Main workflow
Per-sample analysis
Optional
\ No newline at end of file