From dff1353790793ec7684a23d13b647e80e634cb1d Mon Sep 17 00:00:00 2001 From: Kiah McIntosh Date: Tue, 26 May 2026 12:27:15 +0000 Subject: [PATCH] Tube map update --- docs/images/wf-transcriptomes.drawio.svg | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/images/wf-transcriptomes.drawio.svg b/docs/images/wf-transcriptomes.drawio.svg index 958a80f..7542dbd 100644 --- a/docs/images/wf-transcriptomes.drawio.svg +++ b/docs/images/wf-transcriptomes.drawio.svg @@ -1,4 +1,4 @@ -
Transcriptome construction
Differential expression
(Requires multiple conditions & replicates)
Sample Sheet
Reference Genome
Reference Annotation
Alignment Statistics
Transcriptome GTF
Annotation Summary
Classification Summary
DE Results
DTU Results
Transcriptome FASTA
Report HTML
Read Statistics
Transcriptome FASTA
Gene & Transcript Count TSVs
Classification Summary
Transcriptome GTF
Gene & Transcript Count TSVs
FASTQ
BAM
bedMethyl
DEXSeq
Report
DESeq2
minimap2
bambu
fastcat
Prepare annotation
SQANTI3
Validation
modkit
wf-transcriptomes
v2.0.*
Main workflow
Per-sample analysis
Optional
\ No newline at end of file +
Transcriptome construction
Transcrip...
Differential expression
(Requires multiple conditions & replicates)
Differential express...
Modifications
Modificat...
Sample Sheet
Sample She...
Reference Genome
Reference G...
Reference Annotation
Reference...
Alignment Statistics
Alignment S...
Transcriptome GTF
Transcripto...
Annotation Summary
Annotation...
Classification Summary
Classificat...
DE Results
DE Results
DTU Results
DTU Resul...
Transcriptome FASTA
Transcripto...
Report HTML
Report HTML
Read Statistics
Read Statis...
Transcriptome FASTA
Transcript...
Gene & Transcript Count TSVs
Gene & Transcript Co...
Classification Summary
Classifica...
Transcriptome GTF
Transcript...
Gene & Transcript Count TSVs
Gene & Transcript Co...
FASTQ
FASTQ
BAM
BAM
bedMethyl
bedMethyl
DEXSeq
DEXSeq
Report
Report
DESeq2
DESeq2
minimap2
minimap2
bambu
bambu
fastcat
fastcat
Prepare annotation
Prepare annotation
SQANTI3
SQANTI3
Validation
Validation
modkit
modkit
wf-transcriptomes
wf-transcriptomes
v2.0.*
v2.0.*
Main workflow
Main workflow
Per-sample analysis
Per-sample analysis
Optional
Optional
\ No newline at end of file