Commit Graph

25 Commits

Author SHA1 Message Date
Julian Libiseller-Egger
136ece6a90 update manifest description to match workflow card in app 2022-12-05 21:04:41 +00:00
Sarah Griffiths
d3e48d4278 tag 2022-12-01 21:41:36 +00:00
Sarah Griffiths
43e746f0ea schema updates 2022-12-01 21:05:01 +00:00
Sarah Griffiths
5477e721a2 CW-1170 Fix failed to plot 2022-11-16 20:11:44 +00:00
Sarah Griffiths
cd1f97de4e CW-1162 option to run DE without assembly transcriptome 2022-11-16 12:16:38 +00:00
Sarah Griffiths
0758f4ab51 demo data de 2022-11-08 18:07:44 +00:00
Neil Horner
d8834b7573 Verison bump 2022-08-24 11:38:20 +01:00
Sarah Griffiths
c6b6121491 CW-649 2022-08-23 19:15:46 +00:00
Neil Horner
d477a747e6 Switch isoform table thresholding to just displaying to n rows based on coverage 2022-08-08 13:48:15 +00:00
Neil Horner
956c80573a Fusions 2022-08-01 12:01:01 +00:00
Thomas Rich
7a61c04ed9 Update nextflow_schema.json 2022-07-27 14:35:40 +00:00
Neil Horner
f01b879be9 nf-core lint fixes 2022-07-26 09:54:32 +00:00
Chris Wright
1ab5e2744c Skip fastq>a conversion 2022-07-14 09:08:44 +00:00
Sarah Griffiths
fa1818a81d template updates 2022-07-07 19:14:52 +00:00
Neil Horner
d97e84cdc1 Epi2melabs pychopper 2022-06-01 12:08:00 +00:00
Neil Horner
3b69e64c4f Github issues 2022-04-11 15:08:47 +00:00
Neil Horner
e2f290b415 New docs format 2022-04-08 16:33:50 +00:00
Neil Horner
c2a0f8dc21 Re-add ability to do direct RNA 2022-04-05 18:04:16 +00:00
Neil Horner
7e33eb2c3b Moved fiterable table into aplanat and general tidy up 2022-02-28 14:17:46 +00:00
Neil Horner
76fd8f9c81 Seperated out the params into logical sections 2022-02-23 14:58:39 +00:00
Neil Horner
3030ccbbdf Updated version in schema 2022-02-07 11:56:42 +00:00
Neil Horner
5dfbb0f38a Merge de novo pipeline 2022-01-26 15:54:55 +00:00
Thomas Rich
151ef46522 Update nextflow_schema.json 2022-01-11 16:04:22 +00:00
Neil Horner
458ac5d274 Initial port of ref-isoforms to Nextflow 2021-12-08 14:34:07 +00:00
Chris Wright
e486b98a2c add schema 2021-09-28 15:11:18 +01:00