Neil Horner
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d8d8a791af
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Glue
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2023-02-24 14:42:57 +00:00 |
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Julian Libiseller-Egger
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136ece6a90
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update manifest description to match workflow card in app
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2022-12-05 21:04:41 +00:00 |
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Sarah Griffiths
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d3e48d4278
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tag
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2022-12-01 21:41:36 +00:00 |
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Sarah Griffiths
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43e746f0ea
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schema updates
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2022-12-01 21:05:01 +00:00 |
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Sarah Griffiths
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5477e721a2
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CW-1170 Fix failed to plot
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2022-11-16 20:11:44 +00:00 |
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Sarah Griffiths
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cd1f97de4e
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CW-1162 option to run DE without assembly transcriptome
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2022-11-16 12:16:38 +00:00 |
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Sarah Griffiths
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0758f4ab51
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demo data de
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2022-11-08 18:07:44 +00:00 |
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Neil Horner
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d8834b7573
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Verison bump
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2022-08-24 11:38:20 +01:00 |
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Sarah Griffiths
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c6b6121491
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CW-649
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2022-08-23 19:15:46 +00:00 |
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Neil Horner
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d477a747e6
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Switch isoform table thresholding to just displaying to n rows based on coverage
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2022-08-08 13:48:15 +00:00 |
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Neil Horner
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d6f76de4f4
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Update nextflow.config
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2022-08-01 16:13:32 +00:00 |
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Neil Horner
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956c80573a
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Fusions
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2022-08-01 12:01:01 +00:00 |
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Neil Horner
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f01b879be9
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nf-core lint fixes
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2022-07-26 09:54:32 +00:00 |
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Sarah Griffiths
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fa1818a81d
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template updates
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2022-07-07 19:14:52 +00:00 |
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Neil Horner
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d97e84cdc1
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Epi2melabs pychopper
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2022-06-01 12:08:00 +00:00 |
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Matt Parker
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e9d750bcee
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ignore wf param
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2022-05-26 10:40:51 +01:00 |
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Matt Parker
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79a4bec16d
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Zero hour 9:00 a.m.
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2022-05-26 08:27:38 +01:00 |
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Neil Horner
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3b69e64c4f
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Github issues
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2022-04-11 15:08:47 +00:00 |
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Neil Horner
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c2a0f8dc21
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Re-add ability to do direct RNA
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2022-04-05 18:04:16 +00:00 |
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Neil Horner
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7e33eb2c3b
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Moved fiterable table into aplanat and general tidy up
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2022-02-28 14:17:46 +00:00 |
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Neil Horner
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5dfbb0f38a
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Merge de novo pipeline
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2022-01-26 15:54:55 +00:00 |
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Neil Horner
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458ac5d274
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Initial port of ref-isoforms to Nextflow
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2021-12-08 14:34:07 +00:00 |
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Chris Wright
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e486b98a2c
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add schema
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2021-09-28 15:11:18 +01:00 |
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Sarah Griffiths
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167deee265
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CW-244 optional report name
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2021-09-09 13:39:17 +00:00 |
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Chris Wright
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ab1706603b
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Bump version
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2021-07-28 17:30:27 +00:00 |
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Chris Wright
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fcc1394600
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Switch conda profile to use mamba
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2021-07-27 11:19:11 +01:00 |
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Chris Wright
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b61a1c0f5f
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Update version reporting
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2021-07-23 16:49:32 +01:00 |
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Chris Wright
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2a1ff88cc7
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add fastqingress module
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2021-07-12 21:15:03 +01:00 |
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Chris Wright
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feb1c5e9fd
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Testnewmamba
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2021-06-30 16:59:26 +00:00 |
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Chris Wright
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c11f0f214b
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Update nextflow.config, CHANGELOG.md files
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2021-05-17 15:21:42 +01:00 |
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Chris Wright
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6ee6f171d8
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Tidy up and add mock optional file example
|
2021-04-13 11:46:44 +01:00 |
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Chris Wright
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62afff20c4
|
Add aws batch profile
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2021-03-29 18:10:53 +01:00 |
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Chris Wright
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36cd674fa2
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Simple version bump
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2021-03-24 13:36:58 +00:00 |
|
Chris Wright
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d6233c33a3
|
prep0.0.3
|
2021-03-23 17:34:02 +00:00 |
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Chris Wright
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99a68e4c36
|
Bump wfversion
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2021-03-15 18:15:26 +00:00 |
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Chris Wright
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3a95639952
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Update nextflow.config execution stats location
|
2021-03-09 15:12:05 +00:00 |
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Chris Wright
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ed1fc2c9fd
|
Add larger test data and sample report
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2021-03-01 11:44:41 +00:00 |
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Chris Wright
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5c60ad6779
|
Backport additions from wf-artic
|
2021-02-24 17:45:39 +00:00 |
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Chris Wright
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37d2e6c755
|
add shell guards
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2021-02-15 15:22:13 +00:00 |
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Chris Wright
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b190aabaae
|
update container references
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2021-02-09 15:33:58 +00:00 |
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Chris Wright
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416b482a01
|
Fix config
|
2021-02-04 14:40:48 +00:00 |
|
Chris Wright
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d57326dbff
|
Templating for multiple envs/containers
|
2021-02-04 14:26:27 +00:00 |
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Chris Wright
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dd2c1efd91
|
Condaenv
|
2021-01-29 18:05:35 +00:00 |
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Chris Wright
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dcdf42cb4e
|
First sketch
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2021-01-29 15:04:44 +00:00 |
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