Chris Wright
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6ee6f171d8
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Tidy up and add mock optional file example
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2021-04-13 11:46:44 +01:00 |
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Chris Wright
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62afff20c4
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Add aws batch profile
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2021-03-29 18:10:53 +01:00 |
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Chris Wright
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36cd674fa2
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Simple version bump
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2021-03-24 13:36:58 +00:00 |
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Chris Wright
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d6233c33a3
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prep0.0.3
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2021-03-23 17:34:02 +00:00 |
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Chris Wright
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93d24b8fa1
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Merge branch 'report' into 'dev'
rename report
See merge request epi2melabs/workflow-containers/wf-template!11
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2021-03-23 16:18:53 +00:00 |
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Chris Wright
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d1901bb16f
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rename report
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2021-03-23 16:18:53 +00:00 |
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Chris Wright
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e8e584d451
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Set fastq option straight
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2021-03-19 11:22:10 +00:00 |
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Chris Wright
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4a72aee687
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Merge branch 'newtemp' into 'dev'
Newtemp
See merge request epi2melabs/workflow-containers/wf-template!10
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2021-03-17 12:19:47 +00:00 |
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Chris Wright
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c149382e3c
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Add comments to ci
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2021-03-17 12:16:47 +00:00 |
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Chris Wright
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67d98b9561
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Add comments to ci
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2021-03-17 11:28:56 +00:00 |
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Chris Wright
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3f99c88a9d
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Clean up bin
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2021-03-17 11:24:07 +00:00 |
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Chris Wright
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fba94dcd8f
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Switch to variable based command
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2021-03-17 11:06:24 +00:00 |
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Chris Wright
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f7aa07209b
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Merge branch 'citemplate' into 'dev'
Citemplate
See merge request epi2melabs/workflow-containers/wf-template!8
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2021-03-16 17:34:15 +00:00 |
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Chris Wright
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0511706888
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Citemplate
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2021-03-16 17:34:15 +00:00 |
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Chris Wright
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576e25306e
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Update .gitlab-ci.yml
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2021-03-16 15:37:31 +00:00 |
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Chris Wright
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d74cd3d048
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Update .gitlab-ci.yml
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2021-03-16 14:41:42 +00:00 |
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Chris Wright
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ffb895ef7e
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Merge branch 'citemplate' into 'dev'
Switch to ci template
See merge request epi2melabs/workflow-containers/wf-template!7
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2021-03-16 12:58:57 +00:00 |
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Chris Wright
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e829f60d95
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Switch to ci template
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2021-03-16 12:53:44 +00:00 |
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Chris Wright
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d11e57f286
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Update changelog
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2021-03-15 18:17:06 +00:00 |
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Chris Wright
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99a68e4c36
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Bump wfversion
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2021-03-15 18:15:26 +00:00 |
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Chris Wright
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945de8ab93
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Fix prerelease checks
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2021-03-15 18:08:53 +00:00 |
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Chris Wright
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f97ed4ebfb
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Merge branch 'checks' into 'dev'
fix ci
See merge request epi2melabs/workflow-containers/wf-template!6
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2021-03-15 18:04:54 +00:00 |
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Chris Wright
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68cba9efc0
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fix ci
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2021-03-15 18:04:54 +00:00 |
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Chris Wright
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2d13583e6c
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Merge branch 'fixci' into 'dev'
fix ci
See merge request epi2melabs/workflow-containers/wf-template!5
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2021-03-15 17:36:22 +00:00 |
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Chris Wright
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eea3040d74
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fix ci
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2021-03-15 17:36:22 +00:00 |
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Chris Wright
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5df27390f0
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CI semicolons
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2021-03-15 16:36:10 +00:00 |
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Chris Wright
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845bdceb7c
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More CI fixes
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2021-03-15 16:32:45 +00:00 |
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Chris Wright
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bc2392be4b
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More CI fixes
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2021-03-15 16:25:27 +00:00 |
|
Chris Wright
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363826f0bd
|
Fix CI
|
2021-03-15 16:11:47 +00:00 |
|
Chris Wright
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28ed81d845
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Fix CI
|
2021-03-15 16:07:33 +00:00 |
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Chris Wright
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a2a1ac2739
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Merge branch 'make-prerelease' into 'dev'
deploy from dev branch
See merge request epi2melabs/workflow-containers/wf-template!4
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2021-03-15 16:01:23 +00:00 |
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Chris Wright
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6533b2d9fe
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deploy from dev branch
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2021-03-15 16:00:58 +00:00 |
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Chris Wright
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e984ec361f
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Merge branch 'readme' into 'dev'
Standardise readme
See merge request epi2melabs/workflow-containers/wf-template!3
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2021-03-09 17:23:54 +00:00 |
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Chris Wright
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72ffce613c
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Standardise readme
|
2021-03-09 17:21:21 +00:00 |
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Chris Wright
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3a95639952
|
Update nextflow.config execution stats location
|
2021-03-09 15:12:05 +00:00 |
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Thomas Rich
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e59e0df6c6
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Update main.nf to add an n to the shebang
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2021-03-04 09:29:55 +00:00 |
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Chris Wright
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b86690ea7d
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Do not require github master branch before first push
|
2021-03-01 12:16:04 +00:00 |
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Chris Wright
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021c3a11a3
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Add a changelog
|
2021-03-01 11:53:02 +00:00 |
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Chris Wright
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ed1fc2c9fd
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Add larger test data and sample report
|
2021-03-01 11:44:41 +00:00 |
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Chris Wright
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d79c23ada4
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Merge branch 'dev' of workflow-containers/wf-template into dev
|
2021-03-01 10:33:47 +00:00 |
|
Chris Wright
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d31dfef70c
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Minor edits to readme
|
2021-03-01 10:32:51 +00:00 |
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Chris Wright
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d95ccc2e41
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Merge branch 'updates' into 'dev'
Backport additions from wf-artic
See merge request epi2melabs/workflow-containers/workflow-template!2
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2021-02-24 17:45:39 +00:00 |
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Chris Wright
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5c60ad6779
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Backport additions from wf-artic
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2021-02-24 17:45:39 +00:00 |
|
Chris Wright
|
b876c635ec
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Update .gitlab-ci.yml
|
2021-02-18 18:45:41 +00:00 |
|
Chris Wright
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55a2c4e0bc
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Update .gitlab-ci.yml
|
2021-02-18 18:26:37 +00:00 |
|
Chris Wright
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07f8415a88
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Add github code push
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2021-02-18 12:21:54 +00:00 |
|
Chris Wright
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37d2e6c755
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add shell guards
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2021-02-15 15:22:13 +00:00 |
|
Chris Wright
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1815784a89
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Parameterise dockerhub namespace
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2021-02-09 15:59:24 +00:00 |
|
Chris Wright
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b190aabaae
|
update container references
|
2021-02-09 15:33:58 +00:00 |
|
Chris Wright
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0e0a700406
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Fix config
|
2021-02-04 14:42:55 +00:00 |
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