Commit Graph

11 Commits

Author SHA1 Message Date
Sarah Griffiths
c1f784ad04 fix memory issue by replacing seq alignment stats with flagstat [CW-5858] 2025-03-31 09:20:35 +00:00
Neil Horner
b62722751f Fix overwritten DGE results file 2025-02-18 17:05:45 +00:00
Neil Horner
0a5c39cdf4 Account for stringtie multigene transcript artefacts 2024-12-12 14:30:31 +00:00
Neil Horner
624c16a3b1 Update permissions 2024-12-02 12:55:51 +00:00
Neil Horner
5c4780a1b2 Update report CW-3077 2024-10-25 15:18:05 +00:00
Sarah Griffiths
1c67e3274e Seperate DE files required for the report and to be output to the user 2024-02-09 21:45:22 +00:00
Sarah Griffiths
1be77ba77f CW-3075 improve counts output files 2024-02-02 10:38:50 +00:00
Sarah Griffiths
ab850ac67f tidy up DE outputs 2023-08-10 10:05:11 +00:00
Sarah Griffiths
ec3c346fd8 fix and test for files with no gene id in attributes 2023-07-26 18:14:00 +00:00
Sarah Griffiths
ab275b6440 CW-1920-Annotation-file-types 2023-05-31 20:48:35 +00:00
Neil Horner
d8d8a791af Glue 2023-02-24 14:42:57 +00:00