Natalia Garcia
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cd575b9fcb
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IGV tracks mismatch index when there is one BAM per sample [CW-7332,CW-7349]
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2026-06-16 14:25:43 +00:00 |
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Sam Nicholls
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c21588761b
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wf-transcriptomes v2.0.0
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2026-06-09 11:58:17 +00:00 |
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Natalia Garcia
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531975c004
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Template updates: sort threads param
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2026-05-27 11:59:11 +00:00 |
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Natalia Garcia
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9d59c6b902
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Template updates: reference
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2026-05-27 10:00:40 +00:00 |
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Sarah Griffiths
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3ca4511b5b
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Add force alignment option [CW-7274]
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2026-05-26 14:44:50 +00:00 |
|
Natalia Garcia
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c3d38d9b34
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Template updates (sample_sheet)
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2026-05-20 10:08:52 +00:00 |
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Natalia Garcia
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779388f871
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Pin wf-template@ruo-next
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2026-05-19 14:03:13 +00:00 |
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Sam Nicholls
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06d77b2543
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Use new alignment ingress [CW-7186][CW-7202][CW-7229]
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2026-05-14 09:12:38 +00:00 |
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Chris Wright
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abbd3537ec
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Bring up to date
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2026-04-17 12:29:57 +00:00 |
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Kiah McIntosh
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90e6453a8f
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Template update v5.6.3 [CW-6859]
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2025-12-05 18:16:58 +00:00 |
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Sarah Griffiths
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62e4266040
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Output dexseq file [CW-6285]
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2025-07-29 08:54:20 +00:00 |
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Neil Horner
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18bf1d5b19
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Template update 5.6.0 [CW-6070]
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2025-05-06 10:23:01 +00:00 |
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Sarah Griffiths
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b4bba1432b
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Template v5.5.0 updates
|
2025-03-14 11:04:18 +00:00 |
|
Neil Horner
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d38c7f3661
|
template update
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2024-12-05 10:26:25 +00:00 |
|
Neil Horner
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5c4780a1b2
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Update report CW-3077
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2024-10-25 15:18:05 +00:00 |
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Sarah Griffiths
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7ced52c05b
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Template updates
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2024-09-11 12:47:01 +00:00 |
|
Neil Horner
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abc40d9015
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Add new cDNA kits
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2024-08-07 11:31:14 +00:00 |
|
Neil Horner
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c662293317
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Template update
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2024-06-27 16:13:55 +01:00 |
|
Neil Horner
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e2585dcd11
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Template update 2024 05 24
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2024-05-30 19:40:11 +00:00 |
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Sarah Griffiths
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d7fcb2d5f7
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Temp update
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2024-05-10 08:42:12 +00:00 |
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Sarah Griffiths
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595aae4006
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Template update
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2024-04-03 09:47:29 +00:00 |
|
Sarah Griffiths
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07b9edcb99
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Temp up
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2024-01-04 10:18:39 +00:00 |
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Sarah Griffiths
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ed847d9a1f
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template update
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2023-12-07 14:05:02 +00:00 |
|
Sam Nicholls
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bb99170130
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Template updates [CW-1564][CW-2303][CW-2855]
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2023-10-16 14:17:32 +00:00 |
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Sarah Griffiths
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2bda37388c
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Update fastqingress.nf
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2023-09-05 08:57:28 +00:00 |
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Sarah Griffiths
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b6159b2c26
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nf version
|
2023-08-03 15:54:39 +00:00 |
|
Sarah Griffiths
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a58d08b6c4
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template updates
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2023-07-25 08:33:01 +00:00 |
|
Sam Nicholls
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542f822ca6
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Reconcile template
|
2023-07-04 10:13:05 +00:00 |
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Sarah Griffiths
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61deb0715f
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wf-transcriptomes template update
|
2023-06-08 14:58:50 +00:00 |
|
Sarah Griffiths
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5df7e3c2cd
|
template updates
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2023-05-09 10:09:33 +00:00 |
|
Sarah Griffiths
|
8053448d61
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CW-1882 CSV
|
2023-04-04 11:54:35 +00:00 |
|
Neil Horner
|
d8d8a791af
|
Glue
|
2023-02-24 14:42:57 +00:00 |
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Sarah Griffiths
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43e746f0ea
|
schema updates
|
2022-12-01 21:05:01 +00:00 |
|
Sarah Griffiths
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0758f4ab51
|
demo data de
|
2022-11-08 18:07:44 +00:00 |
|
Neil Horner
|
d537d7b33f
|
Template changes
|
2022-10-07 12:59:18 +00:00 |
|
Sarah Griffiths
|
c6b6121491
|
CW-649
|
2022-08-23 19:15:46 +00:00 |
|
Matt Parker
|
0f38613c6a
|
metamap-fastqingress
|
2022-07-21 12:28:45 +01:00 |
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Sarah Griffiths
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fa1818a81d
|
template updates
|
2022-07-07 19:14:52 +00:00 |
|
Matt Parker
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79a4bec16d
|
Zero hour 9:00 a.m.
|
2022-05-26 08:27:38 +01:00 |
|
Neil Horner
|
458ac5d274
|
Initial port of ref-isoforms to Nextflow
|
2021-12-08 14:34:07 +00:00 |
|
Chris Wright
|
4a1b5cd50b
|
Merge branch 'schema' into 'dev'
add schema
See merge request epi2melabs/workflow-containers/wf-template!25
|
2021-09-29 09:51:37 +00:00 |
|
Chris Wright
|
038d399b12
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Support s3 input paths
|
2021-09-28 17:11:33 +01:00 |
|
Chris Wright
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e486b98a2c
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add schema
|
2021-09-28 15:11:18 +01:00 |
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Sarah Griffiths
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fb0230358f
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Update fastqingress.nf to give error message if no fastq files
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2021-09-08 13:42:51 +00:00 |
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Chris Wright
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2a1ff88cc7
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add fastqingress module
|
2021-07-12 21:15:03 +01:00 |
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