16 lines
410 B
Docker
16 lines
410 B
Docker
ARG BASEIMAGE=ontresearch/base-workflow-image:v0.1.0
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FROM $BASEIMAGE
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ARG ENVFILE=environment.yaml
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COPY $ENVFILE $HOME/environment.yaml
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RUN \
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. $CONDA_DIR/etc/profile.d/mamba.sh \
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&& micromamba activate \
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&& micromamba install -n base --file $HOME/environment.yaml \
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&& micromamba clean --all --yes \
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&& fix-permissions $CONDA_DIR \
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&& fix-permissions $HOME
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USER $WF_UID
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WORKDIR $HOME
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