Sam Nicholls 4bc3cf727f Per-sample mod summary		2026-05-27 08:11:02 +00:00
..
models	Use new alignment ingress [CW-7186][CW-7202][CW-7229]	2026-05-14 09:12:38 +00:00
tests	Per-sample mod summary	2026-05-27 08:11:02 +00:00
wfg_helpers	Use new sample sheet validation	2026-05-22 12:58:17 +00:00
__init__.py	Template updates (sample_sheet)	2026-05-20 10:08:52 +00:00
check_experiment_design.py	Refresh workflow to use bambu, sqanti, and dexseq	2026-05-05 14:10:04 +00:00
check_valid_modbam.py	Per-sample pileup counts [CW-7196]	2026-05-26 09:52:38 +00:00
hierarchical_clustering.py	Clustering plots low data [CW-7275]	2026-05-26 17:10:46 +00:00
prepare_annotation_reference.py	Simplify reference handling through the workflow prepareAnnotation [CW-7232]	2026-05-20 12:49:08 +00:00
report.py	Per-sample mod summary	2026-05-27 08:11:02 +00:00
summarise_modkit_bedmethyl.py	Per-sample mod summary	2026-05-27 08:11:02 +00:00
summarise_sqanti.py	Refresh workflow to use bambu, sqanti, and dexseq	2026-05-05 14:10:04 +00:00
util.py	Template v5.5.0 updates	2025-03-14 11:04:18 +00:00
volcano.py	Report glow up 2 [CW-7207]	2026-05-22 11:55:44 +00:00