Merge branch 'CW-2217' into 'dev'

CW-2217 fix ordering of sample_ids

Closes CW-2217

See merge request epi2melabs/workflows/wf-transcriptomes!112

CHANGELOG.md

@@ -12,7 +12,8 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
     - Values for the condition may be any two distinct strings, for example: treated/untreated; sample/control etc.
 
 ### Fixed
-- Remove default of null for `--ref_transcriptome`
+- Remove default of null for `--ref_transcriptome`.
+- Read mapping summary table in the report has correct sample_ids.
 
 ## [v0.1.13]
 ### Added

bin/workflow_glue/report.py

@@ -901,6 +901,7 @@ def de_section(report):
 def main(args):
     """Run the entry point."""
     sample_ids = args.sample_ids
+    sample_ids.sort()
 
     report = WFReport(
         "Transcript isoform report", "wf-transcriptomes",