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Add 2'-O-* mod_code labels [CW-7421]

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Sam Nicholls 2026-07-14 09:54:50 +00:00
parent c09fa66ffc
commit 59f6db51bb
2 changed files with 6 additions and 0 deletions
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2
CHANGELOG.md
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@ -10,6 +10,8 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
### Fixed ### Fixed
- Incorrect strand assignment when mapping cDNA reads is fixed by using minimap2 `-ub` instead of `-uf`. - Incorrect strand assignment when mapping cDNA reads is fixed by using minimap2 `-ub` instead of `-uf`.
- Remove mention of analysis_group and type from `README.md` as they are not relevant for this workflow. - Remove mention of analysis_group and type from `README.md` as they are not relevant for this workflow.
### Changed
- 2Ome* mod code labels are used in place of CHEBI numbers in output file names and reports for 2'-O-methylation modifications.
## [v2.0.1] ## [v2.0.1]

4
data/mod_code_labels.tsv
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@ -3,3 +3,7 @@ A:17596 inosine
A:a m6A A:a m6A
C:m m5C C:m m5C
T:17802 pseU T:17802 pseU
C:19228 2OmeC
A:69426 2OmeA
G:19229 2OmeG
T:19227 2OmeU

1 mod_code label
3 A:a m6A
4 C:m m5C
5 T:17802 pseU
6 C:19228 2OmeC
7 A:69426 2OmeA
8 G:19229 2OmeG
9 T:19227 2OmeU