wf-transcriptomes-v202/CHANGELOG.md

Changelog

All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.

Unreleased

Added

• --direct_rna option.

[v0.1.1]

Fixed

• Incorrect numbers and of transcripts caused by merging gff files with same gene and transcript ids
• Error handling in de novo pipeline. Skip clusters in build_backbones that cause an isONclust2 error
• Several small fixes in report plotting

[v0.1.0]

Added

• Added the denovo pipeline

Changed

• Updates to the report plots

[v0.0.1]

Added

• First release
• Initial port of Snakemake WF from https://github.com/nanoporetech/pipeline-nanopore-ref-isoforms