Matt Parker
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2da8b8286c
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CW-2754-dead-links-readme
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2023-09-12 14:26:03 +01:00 |
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Sarah Griffiths
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edf3a24315
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deal with transcriptome fasta headers that contains |
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2023-09-06 20:18:40 +00:00 |
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Sarah Griffiths
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2ce40ee2f0
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common sha update and tag
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2023-08-10 12:48:45 +00:00 |
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Sarah Griffiths
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ab850ac67f
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tidy up DE outputs
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2023-08-10 10:05:11 +00:00 |
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Sarah Griffiths
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d535778497
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add titles
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2023-08-08 11:18:15 +00:00 |
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Sarah Griffiths
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b6159b2c26
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nf version
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2023-08-03 15:54:39 +00:00 |
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Sarah Griffiths
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ec3c346fd8
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fix and test for files with no gene id in attributes
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2023-07-26 18:14:00 +00:00 |
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Sarah Griffiths
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08de000d12
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CW-2209 docs remove =
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2023-07-25 09:51:34 +00:00 |
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Sarah Griffiths
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a58d08b6c4
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template updates
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2023-07-25 08:33:01 +00:00 |
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Sarah Griffiths
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f86b74a494
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CW-2217 fix ordering of sample_ids
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2023-07-12 11:05:34 +00:00 |
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Sarah Griffiths
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a3bc02888e
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tag v0.2.0
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2023-07-12 08:21:11 +00:00 |
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Sarah Griffiths
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df6c9a2a31
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CW-2313 remove condition sheet requirement
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2023-07-10 16:45:32 +00:00 |
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Sarah Griffiths
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79d5821c14
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CW-2307 ref_transcriptome default not null
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2023-06-28 15:19:41 +00:00 |
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Sam Nicholls
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8206a3173c
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GitHub issue templates [CW-2283]
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2023-06-20 19:18:00 +01:00 |
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Sarah Griffiths
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9f449ae467
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CW-2188 add test for denovo plus warnings
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2023-06-14 13:21:27 +00:00 |
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Sam Nicholls
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e359561703
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Update nextflowVersion to 22.10.8
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2023-06-12 11:28:39 +01:00 |
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Sarah Griffiths
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61deb0715f
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wf-transcriptomes template update
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2023-06-08 14:58:50 +00:00 |
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Sarah Griffiths
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ab275b6440
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CW-1920-Annotation-file-types
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2023-05-31 20:48:35 +00:00 |
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Sarah Griffiths
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970ffa9734
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tag
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2023-05-16 16:34:08 +00:00 |
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Sam Nicholls
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63bef44dcc
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Add AWS demo url configuration
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2023-05-16 14:59:53 +01:00 |
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Sarah Griffiths
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5df7e3c2cd
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template updates
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2023-05-09 10:09:33 +00:00 |
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Sarah Griffiths
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a4c472062c
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tag
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2023-04-06 08:28:13 +00:00 |
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Sarah Griffiths
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8053448d61
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CW-1882 CSV
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2023-04-04 11:54:35 +00:00 |
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Neil Horner
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39496c5f01
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V0.1.9 bump
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2023-02-27 09:32:16 +00:00 |
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Julian Libiseller-Egger
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136ece6a90
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update manifest description to match workflow card in app
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2022-12-05 21:04:41 +00:00 |
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Sarah Griffiths
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d3e48d4278
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tag
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2022-12-01 21:41:36 +00:00 |
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Sarah Griffiths
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43e746f0ea
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schema updates
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2022-12-01 21:05:01 +00:00 |
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Sarah Griffiths
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5477e721a2
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CW-1170 Fix failed to plot
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2022-11-16 20:11:44 +00:00 |
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Sarah Griffiths
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5de212cf57
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Move data to AWS
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2022-11-16 18:49:53 +00:00 |
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Sarah Griffiths
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cd1f97de4e
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CW-1162 option to run DE without assembly transcriptome
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2022-11-16 12:16:38 +00:00 |
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Neil Horner
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e339446a8a
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Fix for when JAFFAL returns exit status 1 when no fusions are found
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2022-11-15 19:56:46 +00:00 |
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Sarah Griffiths
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a111cae834
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CW-1167: error if conditionsheet and sample sheet dont match
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2022-11-15 14:59:43 +00:00 |
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Sarah Griffiths
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0758f4ab51
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demo data de
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2022-11-08 18:07:44 +00:00 |
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Neil Horner
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d8834b7573
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Verison bump
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2022-08-24 11:38:20 +01:00 |
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Sarah Griffiths
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c6b6121491
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CW-649
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2022-08-23 19:15:46 +00:00 |
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Neil Horner
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956c80573a
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Fusions
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2022-08-01 12:01:01 +00:00 |
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Matt Parker
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0f38613c6a
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metamap-fastqingress
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2022-07-21 12:28:45 +01:00 |
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Chris Wright
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1ab5e2744c
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Skip fastq>a conversion
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2022-07-14 09:08:44 +00:00 |
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Sarah Griffiths
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fa1818a81d
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template updates
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2022-07-07 19:14:52 +00:00 |
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Neil Horner
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d97e84cdc1
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Epi2melabs pychopper
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2022-06-01 12:08:00 +00:00 |
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Matt Parker
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79a4bec16d
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Zero hour 9:00 a.m.
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2022-05-26 08:27:38 +01:00 |
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Neil Horner
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3b69e64c4f
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Github issues
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2022-04-11 15:08:47 +00:00 |
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Neil Horner
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c2a0f8dc21
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Re-add ability to do direct RNA
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2022-04-05 18:04:16 +00:00 |
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Neil Horner
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4ddc1f16ab
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bump CHANGELOG version
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2022-03-02 19:50:29 +00:00 |
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Neil Horner
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a7568c00b7
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Addded v to changelog version
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2022-02-07 11:36:25 +00:00 |
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Neil Horner
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5dfbb0f38a
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Merge de novo pipeline
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2022-01-26 15:54:55 +00:00 |
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Chris Wright
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ab1706603b
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Bump version
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2021-07-28 17:30:27 +00:00 |
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Chris Wright
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feb1c5e9fd
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Testnewmamba
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2021-06-30 16:59:26 +00:00 |
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Chris Wright
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c11f0f214b
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Update nextflow.config, CHANGELOG.md files
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2021-05-17 15:21:42 +01:00 |
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Chris Wright
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36cd674fa2
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Simple version bump
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2021-03-24 13:36:58 +00:00 |
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